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Supplementary Table 3 Sequence analysis of variant msap profiles isolated from regenerants of


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Supplementary Table 3 Sequence analysis of variant MSAP profiles isolated from regenerants of Codonopsis lanceolata


Clone ID

Size

(bp)


Blast-based homology

Restriction map

EcoRI HpaII/MspI



Hit

Accession number and E-value

MSAP5

170








46bp 124bp


MSAP6

125









MSAP7

316








316bp


MSAP10

265








265bp



MSAP15

412









MSAP16

238

Amino acid transporter

[Pisum sativum]



AAX56951.1

(6E-05)




MSAP17

212









MSAP18

175

ATPase subunit IV

[Panax ginseng]



YP-086954.1

(7E-22)




175bp


MSAP20

197









MSAP25

107











MSAP29

94










MSAP33

257








129bp 56bp


MSAP34

185









MSAP37

141









MSAP43

116









MSAP47

162








56bp 106bp


MSAP48

165








57bp 108bp


MSAP49

96








MSAP53

198








198bp


MSAP56

152








122bp 30bp
















MSAP59

171

Codonopsis lanceolata mRNA for heat-shock protein 18

AB243013.1





HpaII/MspI HpaII/MspI

31bp 140bp



MSAP61

186









MSAP63

99










63bp 36bp


MSAP67

105










MSAP68

105










MSAP72

165









MSAP74

181









MSAP80

233









MSAP82

108

Inula britannica rpl16 gene, partial sequence; chloroplast

AY213926.1(7e-30)



MSAP84

265

RNA polymerase beta'' chain [Cucumis sativus]

CAJ00748.1

(4E-28)




MSAP85

263

Lactuca sativa cultivar Salinas chloroplast

DQ383816.1(1e-20)



MSAP86

154









MSAP 87

464









MSAP88

274

Putative CCCH-type zinc finger protein

[Arabidopsis thaliana]



AAM97061.1

(2E-32)



12bp 21bp 241bp





MSAP92

167










MSAP96

155








94bp 61bp



MSAP98

126













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